Pathview maps, integrates and renders a wide variety of biological data on relevant pathway graphs.

Pathview Web provides easy interactive access, and generates high quality, hyperlinked graphs.


Please cite our paper if you use this website. This will help the Pathview project in return.

  • Luo W, Pant G, Bhavnasi YK, Blanchard SG, Brouwer C. Pathview Web: user friendly pathway visualization and data integration. Nucleic Acids Res, 2017, Web Server issue, doi: 10.1093/ nar/gkx372
  • Luo W, Brouwer C. Pathview: an R/Biocondutor package for pathway-based data integration and visualization. Bioinformatics, 2013, 29(14):1830-1831, doi: 10.1093/bioinformatics/btt285

Please also cite GAGE paper if you are doing pathway analysis besides visualization, i.e. Pathway Selection set to Auto on the New Analysis page.

  • Luo W, Friedman M, etc. GAGE: generally applicable gene set enrichment for pathway analysis. BMC Bioinformatics, 2009, 10, pp. 161, doi: 10.1186/1471-2105-10-161


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