Pathview maps, integrates and renders a wide variety of biological data on relevant pathway graphs.

Pathview Web provides easy interactive access, and generates high quality, hyperlinked graphs.

Citations:

Please cite our paper if you use this website. This will help the Pathview project in return.

  • Luo W, Pant G, Bhavnasi YK, Blanchard SG, Brouwer C. Pathview Web: user friendly pathway visualization and data integration. Nucleic Acids Res, 2017, Web Server issue, doi: 10.1093/ nar/gkx372
  • Luo W, Brouwer C. Pathview: an R/Biocondutor package for pathway-based data integration and visualization. Bioinformatics, 2013, 29(14):1830-1831, doi: 10.1093/bioinformatics/btt285

Please also cite GAGE paper if you are doing pathway analysis besides visualization, i.e. Pathway Selection set to Auto on the New Analysis page.

  • Luo W, Friedman M, etc. GAGE: generally applicable gene set enrichment for pathway analysis. BMC Bioinformatics, 2009, 10, pp. 161, doi: 10.1186/1471-2105-10-161

Contact:

Email us: pathomics@gmail.com